| Name | Version | Summary | date |
| needletail |
0.6.0 |
FASTX parsing and k-mer methods |
2024-11-01 21:35:12 |
| fastq-dl |
3.0.0 |
Download FASTQ files from SRA or ENA repositories. |
2024-10-20 16:03:42 |
| kmerdb |
0.8.10 |
Yet another correction to the 'yet another correction to just a k-mer counter...' |
2024-10-12 23:05:45 |
| fast2q |
2.7.2 |
A Python3 program that counts sequence occurences in fastq files. |
2024-10-07 22:39:01 |
| microsplit |
0.1.0 |
First tool to treat Micro-C data. Before using Microsplit, you need to perform an initial alignment of reads using Bowtie2 with the `--local-very-sensitive` mode and the `-xeq` option to obtain explicit CIGAR strings. After, Microsplit analyse CIGAR score and fragments reads to make new pairs. The cutting site accuracy is really fine. Sensibility is 0,92 and specifity 0,71 |
2024-07-31 13:39:36 |
| fastqwiper |
2024.1.93 |
An ensemble method to recover corrupted FASTQ files, drop or fix pesky lines, remove unpaired reads, and fix reads interleaving |
2024-05-26 07:23:00 |